Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015791559.1_cds_XP_016507878.1_2028
CDS Infomation

[gene=LOC107825525] [db_xref=GeneID:107825525] [protein=probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7] [frame=2] [exception=annotated by transcript or proteomic data] [protein_id=XP_016507878.1] [location=complement(join(101727..102038,102188..102461,105592..>106773))] [gbkey=CDS]
Sequence

CACTTCCTCTCTTGTTGCAGTCGGATGTTGGGTTTAGAGTATCAGTCTAAAAGAGGTTAT
ATTGGGTTAGAATACTATGGACGGACAGTAGGCATCAAGATTATGCCCGTCGGGATACAT
ATGGGTCATATTGAGTCCATGAAGAAACTTGCAGCGAAAGAGTTGATGCTTAATGCGCTA
AAGCAGCAATTTGAAGGGAAAACTGTGTTGCTAGGTGCCGATGACCTGGATATTTTCAAA
GGTATAAACTTAAAGCTTCTAGCTATGGAACAGATGCTCAAACATCACCCCAAGTGGCAA
GGGCAGGCTGTGTTGGTCCAGATTGCAAATCCTACGAGGGGTAAAGGAGTAGATTTTGAC
GAAATACAGGCTGAGATATCGGAAAGCTGTAAGAGAATCAATAAGCAATTCGGCAAGCCT
GGATATGAGCCTATAGTTTATATTGATAGGCCCGTGTCAAGCAGTGAACGCATGGCATAT
TACAGTATTGCAGAATGTGTTGTTGTCACGGCTGTGAGGGATGGGATGAACCTAACTCCG
TATGAGTACATTGCTTGTCGACAAGGAATGTCTGGCTCAGAAGCAGATTCAGATGTAGAT
GAACCTAAGAAGAGCATGTTAGTTGTATCTGAATTCATTGGGTGTTCACCTTCACTGAGT
GGGGCCATTCGAGTCAACCCGTGGAATGTTGAAGCAACTGCCGAGGCAATGAATGAGGCT
ATATCTATGGCTGAACCAGAGAAGCAGCTACGACATGAAAAGCATTATCGTTACGTTAGC
ACCCACGATGTTGCTTATTGGGCAAGAAGCTTCTTGCAAGATATGGAGAGGACTTGTATG
GATCACTTTAGAAAAAGATGCTACGGCATTGGTTTGGGCTTTGGGTTCAGAGTTGTGGCC
CTTGACCCTAACTTTAGAAAGCTTTCAATTGATGATATTGAGTCAGCTTATATTAAGTCT
AAGAGCAGGGCCATATTCCTCGACTATGACGGAACTATGATGCCTCAGAATTCTCTCATT
AAGTCTCCAAGTCCTGAAGTTATCTCAATCCTGAATAAAATTTGTGGTGATCCGAACAAT
ACTGTCTTTATCGTTAGTGGAAGGGGAAGGGACAGCCTGAGCAAATGGTTTTCTCCTTGT
AGGAAACTCGGTCTTGCAGCAGAACATGGCTATTTTGTGAGATGGTCACAAGATCTGGAA
TGGCAAACATGCAGTCAGAACTCTGATTTTGGTTGGATGCATCTTGCCGAACCAGTAATG
CAATCCTATACAGATTCTACAGATGGATCTTGCATTGAAAAAAAGGAAAGTGCTATAGTG
TGGCAGTATCGTGATGCGGATACCGGCTTTGGGTTTTCTCAGGCAAAGGAGATGCTTGAT
CATCTAGAGAGTGTTTTAGCAAATGAACCTGTTGCTGTCAAAAGTGGGCAGTTCATTGTG
GAAGTCAAACCTCAGGGTGTCACCAAAGGTTTAGTTGCAGAAAAAATCTTCACATCGTTG
GCAGAGAAAGGGAAAATGGCAGATTTTGTGCTTTGCATTGGTGATGATCGATCTGATGAG
GATATGTTTGAGATCATCGGTGATGCTTTATCCAGAAATATTCTTTCTTATGATACCAAA
GTATTTGCCTGCACAGTGGGACAAAAACCAAGCAAAGCTAAATATTATTTGGATGACACT
TCAGAGGTTAGACTTATGCTAGAGTCTCTTGCTGAAGCAACTCTTACTCCAGCGACTTCT
GATGAAGAAGCTGACAACTCGGATTGA

Peptide Sequence

PEP ID

XP_016507878.1
PEP Infomation

PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 [Nicotiana tabacum]
Sequence

MEVLYVGSLCVDVDPIEQDDVSNYLLDKFRCVPAFLPPNIVEKYYEGFCKRHLWPLFHYM
LPFSPDHGGRFDRSMWEAYVSANKLFSQKVVEVLNPEDDFVWIHDYHLMVLPTFLRRRFN
RLRMGFFLHSPFPSSEIYRTLPVREEILKALLCADIVGFHTFDYARHFLSCCSRMLGLEY
QSKRGYIGLEYYGRTVGIKIMPVGIHMGHIESMKKLAAKELMLNALKQQFEGKTVLLGAD
DLDIFKGINLKLLAMEQMLKHHPKWQGQAVLVQIANPTRGKGVDFDEIQAEISESCKRIN
KQFGKPGYEPIVYIDRPVSSSERMAYYSIAECVVVTAVRDGMNLTPYEYIACRQGMSGSE
ADSDVDEPKKSMLVVSEFIGCSPSLSGAIRVNPWNVEATAEAMNEAISMAEPEKQLRHEK
HYRYVSTHDVAYWARSFLQDMERTCMDHFRKRCYGIGLGFGFRVVALDPNFRKLSIDDIE
SAYIKSKSRAIFLDYDGTMMPQNSLIKSPSPEVISILNKICGDPNNTVFIVSGRGRDSLS
KWFSPCRKLGLAAEHGYFVRWSQDLEWQTCSQNSDFGWMHLAEPVMQSYTDSTDGSCIEK
KESAIVWQYRDADTGFGFSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQGVTKGLVAE
KIFTSLAEKGKMADFVLCIGDDRSDEDMFEIIGDALSRNILSYDTKVFACTVGQKPSKAK
YYLDDTSEVRLMLESLAEATLTPATSDEEADNSD

Transcript Sequence

Gene sequence data has not been registered.